C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: high mobility group nucleosome binding domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436386 HMGN5-002 ENSG00000198157 9606 - X:81115192-81201913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverPlacentaENST00000436386
Transcript ID Colon Heart Liver Placenta
ENST00000436386 0.690±0.00 0.106±0.00 0.130±0.00 0.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KC CIL_0003KC_0001 CGP X:80670854-81201942
CIL_0003K8 CIL_0003K8_0001 CGP X:81113701-81298547

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IEA chromatin
GO:0005634 IEA nucleus
GO:0031492 IEA nucleosomal DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033597 Hmgn5-001 protein_coding Mus_musculus 0 324

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