C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003K8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198157-ENSG00000131171 CGP 9606 X:81113701-81298547
GeneTranscriptPositionBiotype
ENSG00000131171 (SH3BGRL)
SH3 domain binding glutamate-rich protein like 		ENST00000373212 (SH3BGRL-001) 81201943-81298547 protein_coding
ENST00000463546 (SH3BGRL-003) 81202630-81297591 processed_transcript
ENST00000474113 (SH3BGRL-004) 81255494-81297516 processed_transcript
ENST00000481106 (SH3BGRL-002) 81202128-81297597 processed_transcript
ENSG00000198157 (HMGN5)
high mobility group nucleosome binding domain 5 		ENST00000358130 (HMGN5-001) 81113701-81201942 protein_coding
ENST00000373250 (HMGN5-007) 81114985-81121638 protein_coding
ENST00000430960 (HMGN5-006) 81115054-81121683 protein_coding
ENST00000436386 (HMGN5-002) 81115192-81201913 protein_coding
ENST00000447319 (HMGN5-004) 81114835-81121688 protein_coding
ENST00000451455 (HMGN5-003) 81116204-81201886 protein_coding
ENST00000491275 (HMGN5-005) 81115111-81121688 processed_transcript
ENSG00000264374 (AL357115.1)
 ENST00000581916 (AL357115.1-201) 81240820-81240901 miRNA
CIL_0003K8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031245-ENSMUSG00000031246 CGP 10090 X:109004534-109197873
GeneTranscriptPositionBiotype
ENSMUSG00000031245 (Hmgn5)
high-mobility group nucleosome binding domain 5 		ENSMUST00000033597 (Hmgn5-001) 109004534-109013404 protein_coding
ENSMUSG00000031246 (Sh3bgrl)
SH3-binding domain glutamic acid-rich protein like 		ENSMUST00000033598 (Sh3bgrl-001) 109095365-109162471 protein_coding
ENSMUST00000126097 (Sh3bgrl-002) 109113972-109154338 processed_transcript
ENSMUST00000133614 (Sh3bgrl-003) 109095509-109197873 processed_transcript
ENSMUSG00000077652 (Gm23322)
predicted gene, 23322 		ENSMUST00000104464 (Gm23322-201) 109009681-109009847 snRNA
ENSMUSG00000083210 (Gm14869)
predicted gene 14869 		ENSMUST00000119007 (Gm14869-001) 109120801-109121684 processed_pseudogene
ENSMUSG00000088298 (Gm26415)
predicted gene, 26415 		ENSMUST00000157673 (Gm26415-201) 109115225-109115516 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K8_0001ENSG00000131171ENST00000373212ENST00000463546ENST00000474113ENST00000481106ENSG00000198157ENST00000358130ENST00000373250ENST00000430960ENST00000436386ENST00000447319ENST00000451455ENST00000491275ENSG00000264374ENST00000581916CIL_0003K8_0002ENSMUSG00000031245ENSMUST00000033597ENSMUSG00000031246ENSMUST00000033598ENSMUST00000126097ENSMUST00000133614ENSMUSG00000077652ENSMUST00000104464ENSMUSG00000083210ENSMUST00000119007ENSMUSG00000088298ENSMUST00000157673
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K8_0001ENSG00000131171ENST00000373212ENST00000463546ENST00000474113ENST00000481106ENSG00000198157ENST00000358130ENST00000373250ENST00000430960ENST00000436386ENST00000447319ENST00000451455ENST00000491275ENSG00000264374ENST00000581916CIL_0003K8_0002ENSMUSG00000031245ENSMUST00000033597ENSMUSG00000031246ENSMUST00000033598ENSMUST00000126097ENSMUSG00000077652ENSMUST00000104464ENSMUSG00000083210ENSMUST00000119007ENSMUSG00000088298ENSMUST00000157673
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131171 ENST00000373212 30.236±0.00 29.761±0.00 6.989±0.00 31.418±15.69 20.426±3.16 31.208±19.04 7.321±4.33 18.785±16.82 16.754±11.86 37.261±14.87 2.988±0.00 19.131±15.80 16.639±5.98 20.185±15.14
ENST00000463546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.631±0.00 4.768±0.00 N/A
ENST00000474113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.133±0.00 5.862±0.00 4.149±0.00
ENST00000481106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.965±0.00 10.595±0.00 7.488±0.00
ENSG00000198157 ENST00000358130 N/A N/A N/A 0.767±0.00 N/A 1.789±1.70 N/A N/A 0.059±0.00 0.023±0.00 N/A 0.960±0.00 0.096±0.01 8.663±3.16
ENST00000373250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.448±0.00 N/A N/A N/A
ENST00000430960 N/A N/A 0.383±0.00 N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A 0.843±0.59 0.120±0.00 9.084±0.00
ENST00000436386 N/A N/A N/A N/A N/A 0.690±0.00 0.106±0.00 N/A 0.130±0.00 N/A N/A N/A 0.249±0.00 N/A
ENST00000447319 1.835±0.00 2.749±0.00 N/A N/A 3.498±0.00 4.540±0.00 0.629±0.00 N/A N/A 1.845±0.00 N/A N/A 0.070±0.00 2.659±0.00
ENST00000451455 N/A N/A N/A N/A 0.485±0.00 N/A N/A 0.515±0.00 N/A N/A N/A 0.369±0.00 0.274±0.07 N/A
ENST00000491275 N/A N/A 0.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264374 ENST00000581916 N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031245 ENSMUST00000033597 1.651±0.47 1.274±0.54 5.845±1.76 4.914±0.04 0.722±0.41 1.248±0.45 1.596±0.22 2.924±0.67 10.249±7.60 1.518±0.20 2.599±0.29 4.662±4.93 91.058±93.62 7.895±13.56
ENSMUSG00000031246 ENSMUST00000033598 37.038±3.88 11.419±1.71 81.598±7.96 34.263±21.02 17.112±2.07 9.246±0.95 8.139±0.67 11.445±1.55 18.860±10.05 40.600±3.48 2.969±0.41 16.402±10.67 10.955±7.47 2.103±0.92
ENSMUST00000126097 N/A N/A N/A 67.518±0.00 N/A N/A N/A N/A N/A N/A N/A 180.814±0.00 31.855±9.92 6.398±0.00
ENSMUST00000133614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077652 ENSMUST00000104464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.740±0.00 N/A
ENSMUSG00000083210 ENSMUST00000119007 0.142±0.04 0.189±0.12 0.075±0.04 0.331±0.00 0.422±0.13 0.234±0.11 0.142±0.05 0.143±0.04 0.201±0.11 0.206±0.00 N/A 0.379±0.25 0.020±0.00 0.070±0.00
ENSMUSG00000088298 ENSMUST00000157673 0.363±0.00 N/A 0.497±0.00 0.361±0.00 0.432±0.13 N/A 0.324±0.11 N/A 0.336±0.11 0.597±0.00 N/A N/A 0.426±0.23 N/A

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