C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide E pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436794 SNRPEP9-001 ENSG00000214124 9606 + X:24513450-24513687 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonOvaryTestisENST00000436794
Transcript ID Adipose Adrenal Breast Colon Ovary Testis
ENST00000436794 0.261±0.00 0.069±0.00 2.929±0.00 2.544±0.00 0.137±0.00 0.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084H CIL_00084H_0001 VISTA X:24441239-25041771
CIL_0008NE CIL_0008NE_0001 VISTA X:24504486-25106506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172079 Snrpe-005 nonsense_mediated_decay Mus_musculus 0 204
ENSMUST00000166915 Snrpe-001 protein_coding Mus_musculus 0 204
ENSMUST00000121967 Gm14284-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000164096 Snrpe-002 protein_coding Mus_musculus 6.02558e-44 180
ENSMUST00000164574 Snrpe-004 protein_coding Mus_musculus 3e-22 108
ENSMUST00000166291 Snrpe-003 protein_coding Mus_musculus 3e-22 108

Loading