C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: autophagy related 9A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436856 ATG9A-013 ENSG00000198925 9606 - 2:219224808-219229618 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000436856
Transcript ID Bladder
ENST00000436856 3.884±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006EB CIL_0006EB_0001 CGP 2:219195237-219218990
CIL_0006EA CIL_0006EA_0001 CGP 2:219209768-219229717
CIL_0006EI CIL_0006EI_0001 CGP 2:219209772-219236669

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040689 Atg9a-201 protein_coding Mus_musculus 0 893
ENSMUST00000188347 Atg9a-001 protein_coding Mus_musculus 0 893
ENSMUST00000189702 Atg9a-002 protein_coding Mus_musculus 0 893
ENSMUST00000188430 Atg9a-004 retained_intron Mus_musculus 0 839
ENSMUST00000189665 Atg9a-003 nonsense_mediated_decay Mus_musculus 0 839
ENSMUST00000189820 Atg9a-005 protein_coding Mus_musculus 0 793
ENSMUST00000187601 Atg9a-007 retained_intron Mus_musculus 0 285
ENSMUST00000186744 Atg9a-006 protein_coding Mus_musculus 0 276

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