C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane BAX inhibitor motif containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437694 TMBIM1-004 ENSG00000135926 9606 - 2:218275432-218292503 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainMuscleOvaryENST00000437694
Transcript ID Bladder Brain Muscle Ovary
ENST00000437694 5.740±0.00 5.943±0.00 16.630±0.00 10.727±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VJ CIL_0005VJ_0001 CGP 2:218264123-218346793
CIL_0005VI CIL_0005VI_0001 CGP 2:218270392-218346793
CIL_0005VH CIL_0005VH_0001 CGP 2:218274192-218368099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113796 Tmbim1-002 protein_coding Mus_musculus 0 652
ENSMUST00000016309 Tmbim1-001 protein_coding Mus_musculus 0 652
ENSMUST00000152603 Tmbim1-004 retained_intron Mus_musculus 0 529
ENSMUST00000135384 Tmbim1-003 retained_intron Mus_musculus 0 486
ENSMUST00000128505 Tmbim1-008 protein_coding Mus_musculus 0 252

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