C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ and LIM domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437932 PDLIM5-203 ENSG00000163110 9606 + 4:94451857-94668227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyPlacentaTestisENST00000437932
Transcript ID Adipose Breast Kidney Placenta Testis
ENST00000437932 2.570±0.00 1.982±0.00 7.049±0.00 3.317±0.00 9.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091X CIL_00091X_0001 VISTA 4:94368294-94970308
CIL_0001S9 CIL_0001S9_0002 CGP 4:94451857-95158448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029941 Pdlim5-201 protein_coding Mus_musculus 0 1205
ENSMUST00000058626 Pdlim5-202 protein_coding Mus_musculus 0 427
ENSMUST00000090134 Pdlim5-203 protein_coding Mus_musculus 0 418
ENSMUST00000168967 Pdlim5-204 protein_coding Mus_musculus 0 418
ENSMUST00000170361 Pdlim5-205 protein_coding Mus_musculus 0 368

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