C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: strawberry notch homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438103 SBNO2-003 ENSG00000064932 9606 - 19:1107637-1132221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000438103
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000438103 2.618±0.00 29.643±0.00 0.295±0.00 1.294±1.05 1.446±0.00 11.802±0.00 1.921±0.00 9.353±0.00 1.189±0.05 33.841±0.00 0.552±0.00 9.350±1.95 5.834±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QT CIL_0000QT_0001 CGP 19:1103926-1174283
CIL_0000QW CIL_0000QW_0001 CGP 19:1107636-1228435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002281 IMP macrophage activation involved in immune response
GO:0005575 ND cellular_component
GO:0006351 IEA transcription, DNA-templated
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0050727 IMP regulation of inflammatory response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042771 Sbno2-201 protein_coding Mus_musculus 0 3168
ENSDART00000113907 sbno1-201 protein_coding Danio_rerio 0 219

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