C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438393 BRD1-004 ENSG00000100425 9606 - 22:49773283-49823213 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverLungMusclePlacentaTestisENST00000438393
Transcript ID Adrenal Brain Breast Kidney Liver Lung Muscle Placenta Testis
ENST00000438393 1.493±0.00 0.862±0.10 1.587±0.00 1.473±0.98 1.524±0.27 2.379±0.00 1.079±0.26 1.519±0.34 6.267±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IS CIL_0007IS_0001 CGP 22:49773283-49890078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109381 Brd1-001 protein_coding Mus_musculus 0 1773
ENSMUST00000088911 Brd1-003 protein_coding Mus_musculus 0 1500
ENSMUST00000109380 Brd1-002 protein_coding Mus_musculus 0 1500
ENSMUST00000156155 Brd1-004 processed_transcript Mus_musculus 0 569
ENSMUST00000139515 Brd1-006 processed_transcript Mus_musculus 0 351

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