C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439148 TRPM8-006 ENSG00000144481 9606 + 2:233981808-234018438 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryTestisENST00000439148
Transcript ID Liver Ovary Testis
ENST00000439148 0.026±0.00 0.006±0.00 0.232±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H4 CIL_0007H4_0001 CGP 2:233833416-234019522
CIL_0003R4 CIL_0003R4_0001 CGP 2:233917398-234077134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0006812 IEA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016048 IEA detection of temperature stimulus
GO:0034220 IEA ion transmembrane transport
GO:0050951 IEA sensory perception of temperature stimulus
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171176 Trpm8-201 protein_coding Mus_musculus 0 710
ENSMUST00000040210 Trpm8-002 protein_coding Mus_musculus 0 710
ENSMUST00000113114 Trpm8-001 protein_coding Mus_musculus 0 710

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