C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: aggrecan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439576 ACAN-201 ENSG00000157766 9606 + 15:88803443-88875354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLungPlacentaENST00000439576
Transcript ID Adrenal Lung Placenta
ENST00000439576 0.189±0.00 0.472±0.00 0.092±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011K CIL_00011K_0001 CGP 15:88636153-88875354
CIL_00011L CIL_00011L_0001 CGP 15:88803443-88895626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001502 IEA cartilage condensation
GO:0002063 IEA chondrocyte development
GO:0005515 IEA protein binding
GO:0005540 IEA hyaluronic acid binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005604 IEA basement membrane
GO:0007155 IEA cell adhesion
GO:0030166 IEA proteoglycan biosynthetic process
GO:0030199 IEA collagen fibril organization
GO:0030246 IEA carbohydrate binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032835 Acan-201 protein_coding Mus_musculus 0 2316

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