C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439616 OGDH-005 ENSG00000105953 9606 + 7:44606572-44708230 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000439616
Transcript ID Muscle
ENST00000439616 24.688±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000J7 CIL_0000J7_0001 CGP 7:44577894-44709066
CIL_0000J8 CIL_0000J8_0001 CGP 7:44606572-44769881

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004591 IEA oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005739 IDA mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0008152 IEA metabolic process
GO:0016624 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 IEA thiamine pyrophosphate binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101554 Ogdh-004 protein_coding Mus_musculus 0 2811
ENSMUST00000081894 Ogdh-003 protein_coding Mus_musculus 0 2811
ENSMUST00000093350 Ogdh-002 protein_coding Mus_musculus 0 2811
ENSMUST00000003461 Ogdh-001 protein_coding Mus_musculus 0 2811
ENSMUST00000125929 Ogdh-008 retained_intron Mus_musculus 0 401
ENSMUST00000135124 Ogdh-006 protein_coding Mus_musculus 0 340
ENSMUST00000140765 Ogdh-005 protein_coding Mus_musculus 0 340

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