C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ZFP36 ring finger protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439696 ZFP36L1-001 ENSG00000185650 9606 - 14:68787662-68793240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000439696
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000439696 195.026±0.00 32.363±0.00 21.595±0.00 11.347±6.97 39.262±15.76 53.899±51.95 7.885±6.84 9.680±0.00 18.427±0.00 34.893±0.00 1.433±0.00 86.423±66.84 157.835±14.14 57.007±1.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JV CIL_0001JV_0002 CGP 14:67819779-68796253
CIL_0008VV CIL_0008VV_0001 VISTA 14:68209687-68812666
CIL_0002CK CIL_0002CK_0001 CGP 14:68787660-68979440

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000288 IEA nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0001570 IEA vasculogenesis
GO:0003342 IEA proepicardium development
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006417 IEA regulation of translation
GO:0006915 IEA apoptotic process
GO:0007507 IEA heart development
GO:0008283 IEA cell proliferation
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0021915 IEA neural tube development
GO:0033077 IEA T cell differentiation in thymus
GO:0035264 IEA multicellular organism growth
GO:0043488 IDA regulation of mRNA stability
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0048568 IEA embryonic organ development
GO:0060710 IEA chorio-allantoic fusion
GO:0060712 IEA spongiotrophoblast layer development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021552 Zfp36l1-201 protein_coding Mus_musculus 0 1938
ENSMUST00000165114 Zfp36l1-202 protein_coding Mus_musculus 0 1670
ENSMUST00000118349 Gm14556-001 processed_pseudogene Mus_musculus 0 1142
ENSMUST00000060366 Zfp36l2-001 protein_coding Mus_musculus 0 279

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