C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185650-ENSG00000072110 CGP 9606 14:68787660-68979440
GeneTranscriptPositionBiotype
ENSG00000072110 (ACTN1)
actinin, alpha 1 		ENST00000193403 (ACTN1-001) 68874143-68979440 protein_coding
ENST00000376839 (ACTN1-007) 68874783-68977566 protein_coding
ENST00000394419 (ACTN1-005) 68874323-68979239 protein_coding
ENST00000438964 (ACTN1-002) 68874686-68979262 protein_coding
ENST00000538545 (ACTN1-006) 68874859-68979076 protein_coding
ENST00000544964 (ACTN1-019) 68879046-68890142 protein_coding
ENST00000553290 (ACTN1-020) 68879049-68884303 protein_coding
ENST00000553370 (ACTN1-015) 68904702-68977654 protein_coding
ENST00000553659 (ACTN1-013) 68925559-68978269 protein_coding
ENST00000553779 (ACTN1-016) 68910020-68947548 protein_coding
ENST00000553882 (ACTN1-009) 68874323-68879022 retained_intron
ENST00000554158 (ACTN1-017) 68902543-68921359 processed_transcript
ENST00000554508 (ACTN1-018) 68893703-68921038 processed_transcript
ENST00000555075 (ACTN1-022) 68874786-68882567 protein_coding
ENST00000555616 (ACTN1-012) 68892228-68978289 protein_coding
ENST00000556083 (ACTN1-008) 68874318-68888263 retained_intron
ENST00000556203 (ACTN1-010) 68973781-68979031 processed_transcript
ENST00000556343 (ACTN1-021) 68883265-68884295 processed_transcript
ENST00000556432 (ACTN1-023) 68879864-68881122 retained_intron
ENST00000556433 (ACTN1-011) 68893665-68978735 protein_coding
ENST00000556571 (ACTN1-014) 68910022-68978240 protein_coding
ENSG00000258531 (BANF1P1)
barrier to autointegration factor 1 pseudogene 1 		ENST00000553684 (BANF1P1-001) 68936602-68936864 processed_pseudogene
ENSG00000258565 (BLZF2P)
basic leucine zipper nuclear factor 2 pseudogene 		ENST00000553776 (BLZF2P-001) 68867857-68869951 unprocessed_pseudogene
ENSG00000270975 (RP11-723P16.3)
 ENST00000605130 (RP11-723P16.3-001) 68861762-68862525 unprocessed_pseudogene
CIL_0002CK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021127-ENSMUSG00000015143 CGP 10090 12:80107760-80260371
GeneTranscriptPositionBiotype
ENSMUSG00000015143 (Actn1)
actinin, alpha 1 		ENSMUST00000021554 (Actn1-201) 80167542-80260371 protein_coding
ENSMUST00000167327 (Actn1-202) 80168322-80260091 protein_coding
ENSMUSG00000021127 (Zfp36l1)
zinc finger protein 36, C3H type-like 1 		ENSMUST00000021552 (Zfp36l1-201) 80107760-80113013 protein_coding
ENSMUST00000165114 (Zfp36l1-202) 80108698-80112998 protein_coding
ENSMUSG00000097417 (Gm26669)
predicted gene, 26669 		ENSMUST00000181323 (Gm26669-201) 80108034-80113000 lincRNA
ENSMUSG00000097729 (2310015A10Rik)
RIKEN cDNA 2310015A10 gene 		ENSMUST00000180643 (2310015A10Rik-201) 80120548-80132844 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CK_0001ENSG00000072110ENST00000193403ENST00000376839ENST00000394419ENST00000438964ENST00000538545ENST00000544964ENST00000553290ENST00000553370ENST00000553659ENST00000553779ENST00000553882ENST00000554158ENST00000554508ENST00000555075ENST00000555616ENST00000556083ENST00000556203ENST00000556343ENST00000556432ENST00000556433ENST00000556571ENSG00000258531ENST00000553684ENSG00000258565ENST00000553776ENSG00000270975ENST00000605130CIL_0002CK_0002ENSMUSG00000015143ENSMUST00000021554ENSMUST00000167327ENSMUSG00000021127ENSMUST00000021552ENSMUST00000165114ENSMUSG00000097417ENSMUST00000181323ENSMUSG00000097729ENSMUST00000180643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CK_0001ENSG00000072110ENST00000193403ENST00000376839ENST00000394419ENST00000438964ENST00000538545ENST00000553882ENSG00000258531ENST00000553684ENSG00000258565ENST00000553776ENSG00000270975ENST00000605130CIL_0002CK_0002ENSMUSG00000015143ENSMUST00000021554ENSMUST00000167327ENSMUSG00000021127ENSMUST00000021552ENSMUST00000165114ENSMUSG00000097417ENSMUST00000181323ENSMUSG00000097729ENSMUST00000180643
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072110 ENST00000193403 7.681±0.00 49.015±0.00 4.412±0.00 8.185±0.27 24.584±2.44 46.638±33.77 5.959±3.68 8.886±2.64 36.321±0.00 18.241±12.72 0.938±0.44 33.523±24.85 29.665±9.99 13.578±9.38
ENST00000376839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.146±0.00 2.969±0.00
ENST00000394419 9.511±0.00 32.861±0.00 N/A N/A 19.521±0.00 54.483±0.00 6.040±0.00 15.632±0.00 20.645±0.00 39.663±0.00 4.140±0.00 8.461±0.00 15.539±0.50 21.904±0.00
ENST00000438964 30.447±0.00 89.458±0.00 N/A 13.032±0.00 46.574±0.00 67.105±0.00 11.277±0.00 12.574±0.00 27.998±0.00 49.721±0.00 3.589±2.61 36.380±17.44 24.170±6.68 18.124±13.43
ENST00000538545 N/A N/A N/A 2.336±0.00 17.563±0.00 5.752±0.00 1.887±0.00 1.758±0.00 N/A 5.569±0.00 1.659±0.00 6.214±0.00 N/A N/A
ENST00000544964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.080±0.00 N/A N/A
ENST00000554158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258531 ENST00000553684 N/A N/A N/A N/A 0.587±0.00 N/A N/A 0.093±0.00 0.173±0.00 N/A N/A 0.128±0.00 N/A N/A
ENSG00000258565 ENST00000553776 0.068±0.00 0.269±0.00 N/A 0.113±0.10 0.116±0.00 0.114±0.03 N/A 0.049±0.00 N/A N/A N/A 0.033±0.01 N/A 0.099±0.00
ENSG00000270975 ENST00000605130 0.187±0.00 0.408±0.00 N/A 0.162±0.00 0.551±0.00 0.956±0.00 0.422±0.00 0.752±0.00 0.597±0.00 0.196±0.00 N/A 0.145±0.02 0.127±0.00 0.954±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015143 ENSMUST00000021554 16.160±5.87 3.455±0.56 57.901±6.93 6.016±0.59 11.465±3.33 24.309±3.66 2.325±0.39 5.757±0.85 5.969±3.20 12.850±3.35 0.817±0.40 33.926±6.81 39.849±22.69 1.063±0.30
ENSMUST00000167327 34.405±21.33 1.995±0.08 178.023±34.49 15.834±19.19 10.154±1.68 39.221±6.16 8.129±1.07 6.953±0.68 2.926±1.23 19.952±4.37 1.164±0.37 50.908±13.56 35.183±25.84 2.474±0.80
ENSMUSG00000021127 ENSMUST00000021552 23.196±14.20 34.569±6.89 23.180±1.05 4.280±0.82 31.758±11.77 23.614±8.09 4.734±0.83 14.301±5.26 9.496±5.15 35.279±6.05 1.948±0.60 26.008±15.31 5.126±1.87 3.583±0.65
ENSMUST00000165114 51.383±2.52 57.078±36.95 30.639±0.00 N/A 35.726±9.82 30.115±13.76 7.368±3.79 15.644±4.67 6.681±2.66 30.229±10.60 2.179±0.20 33.107±22.51 3.960±1.59 3.592±3.10
ENSMUSG00000097417 ENSMUST00000181323 24.936±10.50 139.773±0.00 44.058±2.42 10.366±5.12 13.160±0.00 N/A 9.928±2.57 18.230±1.86 30.993±18.77 N/A 4.611±1.23 33.791±5.41 6.991±3.71 3.927±1.43
ENSMUSG00000097729 ENSMUST00000180643 2.937±1.34 3.482±0.50 5.097±0.25 1.165±0.10 3.570±1.43 3.070±0.65 2.506±0.64 1.044±0.36 0.788±0.35 2.955±0.64 3.872±0.79 3.604±1.20 0.790±0.37 0.760±0.28

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