C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO1 pseudogene 3 (functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439961 SUMO1P3-001 ENSG00000235082 9606 + 1:160317403-160317706 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyOvaryENST00000439961
Transcript ID Adrenal Brain Breast Colon Kidney Ovary
ENST00000439961 0.194±0.00 0.037±0.00 0.497±0.46 0.176±0.00 0.115±0.00 0.065±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091374 Sumo1-001 protein_coding Mus_musculus 0 479
ENSMUST00000120455 Gm14269-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000123857 Sumo1-002 retained_intron Mus_musculus 0 265
ENSMUST00000185265 Sumo1-004 protein_coding Mus_musculus 0 226
ENSMUST00000191158 Sumo1-003 processed_transcript Mus_musculus 8e-29 130

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