C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14269
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120455 Gm14269-001 ENSMUSG00000084067 10090 - 2:170463514-170463819 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyMusclePlacentaTestisENSMUST00000120455
Transcript ID Bladder Breast Colon Heart Kidney Muscle Placenta Testis
ENSMUST00000120455 0.059±0.00 0.445±0.00 0.827±0.00 0.269±0.00 0.277±0.01 0.139±0.02 0.219±0.14 1.100±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H3 CIL_0001H3_0002 CGP 2:170346991-170497145

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392244 SUMO1-007 protein_coding Homo_sapiens 0 355
ENST00000392245 SUMO1-201 protein_coding Homo_sapiens 0 483
ENST00000392246 SUMO1-001 protein_coding Homo_sapiens 0 483
ENST00000403074 RP11-174C7.1-001 processed_pseudogene Homo_sapiens 0 193
ENST00000409181 SUMO1-005 protein_coding Homo_sapiens 0 339
ENST00000409205 SUMO1-010 protein_coding Homo_sapiens 0 455
ENST00000409368 SUMO1-002 protein_coding Homo_sapiens 0 377
ENST00000409498 SUMO1-003 protein_coding Homo_sapiens 0 466
ENST00000409627 SUMO1-006 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000409712 SUMO1-004 protein_coding Homo_sapiens 0 261
ENST00000429430 SUMO1P4-001 processed_pseudogene Homo_sapiens 0 436
ENST00000439961 SUMO1P3-001 processed_pseudogene Homo_sapiens 0 468
ENST00000452524 SUMO1P2-001 processed_pseudogene Homo_sapiens 0 374
ENST00000469034 SUMO1-008 processed_transcript Homo_sapiens 0 466
ENST00000497904 SUMO1P1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000513479 CTD-2347I17.1-001 processed_pseudogene Homo_sapiens 0 331

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