C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMT3 suppressor of mif two 3 homolog 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185265 Sumo1-004 ENSMUSG00000026021 10090 - 1:59639944-59670739 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CR CIL_0009CR_0002 VISTA 1:59040862-59642046
CIL_00020N CIL_00020N_0002 CGP 1:59482424-59636417
CIL_00020U CIL_00020U_0002 CGP 1:59516264-59670834
CIL_00020T CIL_00020T_0002 CGP 1:59586558-59719044

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392244 SUMO1-007 protein_coding Homo_sapiens 0 460
ENST00000392245 SUMO1-201 protein_coding Homo_sapiens 0 237
ENST00000392246 SUMO1-001 protein_coding Homo_sapiens 0 460
ENST00000403074 RP11-174C7.1-001 processed_pseudogene Homo_sapiens 3e-28 128
ENST00000409181 SUMO1-005 protein_coding Homo_sapiens 0 420
ENST00000409205 SUMO1-010 protein_coding Homo_sapiens 0 444
ENST00000409368 SUMO1-002 protein_coding Homo_sapiens 0 335
ENST00000409498 SUMO1-003 protein_coding Homo_sapiens 0 451
ENST00000409627 SUMO1-006 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000409712 SUMO1-004 protein_coding Homo_sapiens 0 460
ENST00000429430 SUMO1P4-001 processed_pseudogene Homo_sapiens 0 196
ENST00000439961 SUMO1P3-001 processed_pseudogene Homo_sapiens 0 226
ENST00000469034 SUMO1-008 processed_transcript Homo_sapiens 0 244
ENST00000497904 SUMO1P1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000513479 CTD-2347I17.1-001 processed_pseudogene Homo_sapiens 1e-22 110

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