C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane and tetratricopeptide repeat containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440120 TMTC4-012 ENSG00000125247 9606 - 13:100663120-100674795 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000440120
Transcript ID Bladder
ENST00000440120 2.575±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NV CIL_0005NV_0001 CGP 13:100530164-100675093
CIL_0000WK CIL_0000WK_0001 CGP 13:100603927-101416492

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135917 Tmtc4-002 retained_intron Mus_musculus 0 239
ENSMUST00000148661 Tmtc4-004 protein_coding Mus_musculus 0 239
ENSMUST00000126867 Tmtc4-005 protein_coding Mus_musculus 0 239
ENSMUST00000143189 Tmtc4-003 nonsense_mediated_decay Mus_musculus 0 239
ENSMUST00000037726 Tmtc4-001 protein_coding Mus_musculus 0 239
ENSMUST00000128969 Tmtc4-006 nonsense_mediated_decay Mus_musculus 0 233

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