C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Ras and Rab interactor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440354 RIN2-201 ENSG00000132669 9606 + 20:19889566-20001348 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverLungMuscleENST00000440354
Transcript ID Heart Liver Lung Muscle
ENST00000440354 4.005±0.00 1.025±0.00 13.925±0.00 2.174±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MY CIL_0002MY_0001 CGP 20:19212646-20002457
CIL_0007Z5 CIL_0007Z5_0001 VISTA 20:19702996-20303586
CIL_0002MT CIL_0002MT_0001 CGP 20:19886521-20033655

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094480 Rin2-201 protein_coding Mus_musculus 0 1210
ENSMUST00000110005 Rin2-002 protein_coding Mus_musculus 0 1210
ENSMUST00000147976 Rin2-001 nonsense_mediated_decay Mus_musculus 0 1210
ENSMUST00000145874 Rin2-005 processed_transcript Mus_musculus 0 525
ENSMUST00000149269 Rin2-006 processed_transcript Mus_musculus 0 361
ENSDART00000131128 rin2-202 protein_coding Danio_rerio 0 311
ENSDART00000110494 rin2-201 protein_coding Danio_rerio 0 311
ENSDART00000138043 rin2-001 protein_coding Danio_rerio 0 311
ENSMUST00000150449 Rin2-004 nonsense_mediated_decay Mus_musculus 0 265
ENSMUST00000142847 Rin2-003 protein_coding Mus_musculus 2.8026e-45 187
ENSMUST00000144278 Rin2-007 processed_transcript Mus_musculus 2e-27 128

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