C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440915 AP004290.1-001 ENSG00000236583 9606 - 8:99233048-99234459 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverLungOvaryENST00000440915
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Lung Ovary
ENST00000440915 0.021±0.00 0.103±0.00 0.109±0.00 0.122±0.06 0.263±0.25 0.030±0.01 0.078±0.00 0.253±0.00 0.111±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026G CIL_00026G_0001 CGP 8:98944403-99877580
CIL_00090P CIL_00090P_0001 VISTA 8:98972229-99575594
CIL_0006JN CIL_0006JN_0001 CGP 8:99013266-99894062
CIL_0007NL CIL_0007NL_0001 UCNEbase 8:99206329-99799529

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115379 Igf2bp2-004 protein_coding Mus_musculus 0 863
ENSMUST00000129913 Igf2bp2-003 retained_intron Mus_musculus 0 863
ENSMUST00000100052 Igf2bp2-001 protein_coding Mus_musculus 0 863
ENSMUST00000134188 Igf2bp2-009 retained_intron Mus_musculus 0 763
ENSMUST00000127696 Igf2bp2-002 retained_intron Mus_musculus 7e-21 106
ENSMUST00000125926 Igf2bp2-005 processed_transcript Mus_musculus 2e-20 104

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