C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidic acid receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441240 LPAR1-004 ENSG00000198121 9606 - 9:110941668-111038458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryENST00000441240
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000441240 12.566±0.00 3.991±0.00 8.234±0.00 1.962±0.00 13.988±0.00 7.348±0.00 2.265±0.00 4.162±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016H CIL_00016H_0001 CGP 9:110668771-111038458
CIL_00093E CIL_00093E_0001 VISTA 9:110861070-111465765
CIL_00016L CIL_00016L_0001 CGP 9:110873263-111328520

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0070915 IEA lysophosphatidic acid receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107574 Lpar1-004 protein_coding Mus_musculus 0 721
ENSMUST00000107575 Lpar1-003 protein_coding Mus_musculus 0 721
ENSMUST00000107571 Lpar1-002 protein_coding Mus_musculus 0 721
ENSMUST00000055018 Lpar1-001 protein_coding Mus_musculus 0 721
ENSMUST00000155170 Lpar1-008 protein_coding Mus_musculus 0 292
ENSMUST00000147354 Lpar1-006 protein_coding Mus_musculus 0 226
ENSMUST00000145361 Lpar1-007 protein_coding Mus_musculus 2.99878e-43 180

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