C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441778 LDB2-003 ENSG00000169744 9606 - 4:16501541-16898594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000441778
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000441778 23.210±0.00 11.984±0.00 1.151±0.00 4.938±2.69 5.494±4.42 2.408±1.34 2.524±0.00 2.099±0.00 20.993±0.00 1.138±0.00 3.350±2.41 8.510±2.91 3.448±2.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033W CIL_00033W_0003 CGP 4:16160505-16898809
CIL_00033T CIL_00033T_0002 CGP 4:16501541-17512234

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003712 IEA transcription cofactor activity
GO:0005634 IEA:IDA nucleus
GO:0030274 IEA:ISS LIM domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070748 Ldb2-201 protein_coding Mus_musculus 0 1417

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