C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441944 PPIAP33-001 ENSG00000178654 9606 + 9:7597823-7598377 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungTestisENST00000441944
Transcript ID Adrenal Brain Breast Colon Kidney Lung Testis
ENST00000441944 0.298±0.00 0.064±0.00 0.060±0.00 0.028±0.00 0.060±0.00 0.056±0.00 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D7 CIL_0001D7_0001 CGP 9:6757641-7888380

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 634
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 619
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 610
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 588
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 556
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 549
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 512
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 294
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 283
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 239
ENSMUST00000121356 Gm6079-001 processed_pseudogene Mus_musculus 2e-37 159
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 7e-27 124

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