C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443177 RP11-420H19.2-001 ENSG00000227847 9606 + 7:125345825-125346197 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000443177
Transcript ID Brain Testis
ENST00000443177 0.106±0.00 0.063±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OL CIL_0001OL_0001 CGP 7:124822386-127253294

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 333
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 333
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 324
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 315
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 309
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 305
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 265
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 9.94922e-44 180
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 1e-33 147
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 2e-20 102

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