C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443195 RPS4XP4-001 ENSG00000215520 9606 + 1:20525989-20526751 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyOvaryTestisENST00000443195
Transcript ID Adipose Breast Colon Kidney Ovary Testis
ENST00000443195 0.018±0.00 0.057±0.00 0.018±0.00 0.019±0.00 0.023±0.00 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WA CIL_0002WA_0002 CGP 1:20499448-20555010

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 671
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000119790 Gm13680-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000183728 Gm15013-002 protein_coding Mus_musculus 0 610
ENSMUST00000183537 Gm15013-001 translated_processed_pseudogene Mus_musculus 0 610
ENSMUST00000119478 Gm12852-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000155028 Rps4x-003 retained_intron Mus_musculus 0 385
ENSMUST00000119465 Gm12757-001 processed_pseudogene Mus_musculus 8e-28 128

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