C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15013
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183728 Gm15013-002 ENSMUSG00000098559 10090 - X:139713681-139714481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000183728
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000183728 0.597±0.48 0.170±0.01 0.172±0.05 0.067±0.00 0.655±0.00 0.132±0.00 0.108±0.06 0.086±0.03 0.217±0.10 0.128±0.06 0.381±0.13 0.137±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AC CIL_0006AC_0002 CGP X:139563316-139753405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0019843 IEA rRNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316084 RPS4X-001 protein_coding Homo_sapiens 0 987
ENST00000373626 RPS4X-002 protein_coding Homo_sapiens 0 438
ENST00000398541 RPS4XP3-001 processed_pseudogene Homo_sapiens 0 468
ENST00000405151 RPS4XP9-001 processed_pseudogene Homo_sapiens 0 660
ENST00000419038 RPS4XP5-001 transcribed_processed_pseudogene Homo_sapiens 0 678
ENST00000427198 RPS4XP16-001 transcribed_processed_pseudogene Homo_sapiens 0 811
ENST00000443195 RPS4XP4-001 processed_pseudogene Homo_sapiens 0 610
ENST00000446897 RPS4XP11-001 processed_pseudogene Homo_sapiens 0 774
ENST00000458402 RPS4XP2-001 processed_pseudogene Homo_sapiens 0 876
ENST00000460237 RPS4XP19-001 processed_pseudogene Homo_sapiens 0 590
ENST00000477670 RPS4XP6-001 processed_pseudogene Homo_sapiens 0 817
ENST00000479057 RPS4XP17-001 processed_pseudogene Homo_sapiens 8.00141e-43 178
ENST00000482189 RPS4XP1-001 processed_pseudogene Homo_sapiens 0 795
ENST00000483219 RPS4XP13-001 processed_pseudogene Homo_sapiens 0 793
ENST00000486733 RPS4X-003 processed_transcript Homo_sapiens 0 497
ENST00000492695 RPS4X-005 processed_transcript Homo_sapiens 0.000000000001 77
ENST00000493072 RPS4XP14-001 processed_pseudogene Homo_sapiens 0 747
ENST00000505751 RPS4XP20-001 processed_pseudogene Homo_sapiens 0 652
ENST00000508013 RP11-697N18.1-001 unprocessed_pseudogene Homo_sapiens 0 715
ENST00000595905 RPS4XP16-003 processed_transcript Homo_sapiens 0 680
ENST00000596904 RPS4XP16-002 processed_transcript Homo_sapiens 0 490
ENST00000603814 RPS4XP21-001 processed_pseudogene Homo_sapiens 0 662

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