C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13680
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119790 Gm13680-001 ENSMUSG00000081400 10090 - 2:83353157-83353949 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119790 20.963±11.94 1.807±1.42 1.358±0.52 0.956±0.58 16.776±6.33 10.025±3.65 7.677±1.56 9.008±2.03 3.456±2.04 15.253±3.83 0.522±0.35 9.242±5.55 0.155±0.09 0.620±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Q4 CIL_0000Q4_0002 CGP 2:82943634-83664622

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316084 RPS4X-001 protein_coding Homo_sapiens 0 1026
ENST00000373626 RPS4X-002 protein_coding Homo_sapiens 0 449
ENST00000398541 RPS4XP3-001 processed_pseudogene Homo_sapiens 0 484
ENST00000405151 RPS4XP9-001 processed_pseudogene Homo_sapiens 0 717
ENST00000419038 RPS4XP5-001 transcribed_processed_pseudogene Homo_sapiens 0 743
ENST00000427198 RPS4XP16-001 transcribed_processed_pseudogene Homo_sapiens 0 859
ENST00000443195 RPS4XP4-001 processed_pseudogene Homo_sapiens 0 632
ENST00000446897 RPS4XP11-001 processed_pseudogene Homo_sapiens 0 828
ENST00000458402 RPS4XP2-001 processed_pseudogene Homo_sapiens 0 918
ENST00000460237 RPS4XP19-001 processed_pseudogene Homo_sapiens 0 640
ENST00000465034 RPS4XP10-001 processed_pseudogene Homo_sapiens 0 632
ENST00000477670 RPS4XP6-001 processed_pseudogene Homo_sapiens 0 876
ENST00000479057 RPS4XP17-001 processed_pseudogene Homo_sapiens 4.00001e-41 172
ENST00000482189 RPS4XP1-001 processed_pseudogene Homo_sapiens 0 857
ENST00000483219 RPS4XP13-001 processed_pseudogene Homo_sapiens 0 830
ENST00000486733 RPS4X-003 processed_transcript Homo_sapiens 0 520
ENST00000493072 RPS4XP14-001 processed_pseudogene Homo_sapiens 0 789
ENST00000505751 RPS4XP20-001 processed_pseudogene Homo_sapiens 0 673
ENST00000508013 RP11-697N18.1-001 unprocessed_pseudogene Homo_sapiens 0 750
ENST00000595905 RPS4XP16-003 processed_transcript Homo_sapiens 0 732
ENST00000596904 RPS4XP16-002 processed_transcript Homo_sapiens 0 523
ENST00000603814 RPS4XP21-001 processed_pseudogene Homo_sapiens 0 713
ENST00000624653 RPS4Y2-001 protein_coding Homo_sapiens 0 614
ENST00000625126 RPS4Y2-201 protein_coding Homo_sapiens 0 614

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