C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443339 SETD5-002 ENSG00000168137 9606 + 3:9397900-9464753 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QC CIL_0004QC_0001 CGP 3:9362842-9479240
CIL_0002W7 CIL_0002W7_0001 CGP 3:9397615-9553802

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153513 Setd5-011 processed_transcript Mus_musculus 0 4894
ENSMUST00000149584 Setd5-008 retained_intron Mus_musculus 0 3709
ENSMUST00000113157 Setd5-201 protein_coding Mus_musculus 0 3707
ENSMUST00000113155 Setd5-002 protein_coding Mus_musculus 0 3707
ENSMUST00000042889 Setd5-001 protein_coding Mus_musculus 0 3602
ENSMUST00000142215 Setd5-006 processed_transcript Mus_musculus 0 2915
ENSMUST00000141072 Setd5-005 retained_intron Mus_musculus 0 2477
ENSMUST00000138327 Setd5-009 retained_intron Mus_musculus 0 1646
ENSMUST00000124467 Setd5-007 retained_intron Mus_musculus 0 1589
ENSMUST00000143998 Setd5-003 retained_intron Mus_musculus 0 701
ENSMUST00000150107 Setd5-010 retained_intron Mus_musculus 0 542
ENSMUST00000156048 Setd5-013 processed_transcript Mus_musculus 0 418
ENSMUST00000136128 Setd5-004 processed_transcript Mus_musculus 0 416
ENSMUST00000125003 Setd5-012 processed_transcript Mus_musculus 0 309

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