C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, alpha subunit 1 (catalytic) pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443361 RALGAPA1P-001 ENSG00000229419 9606 + 9:105520128-105526359 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000443361
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000443361 0.012±0.00 0.007±0.00 0.296±0.00 0.133±0.13 0.241±0.23 0.605±0.00 0.109±0.00 0.024±0.02 0.191±0.19 0.358±0.00 0.026±0.00 0.129±0.20 0.064±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033S CIL_00033S_0001 CGP 9:105244622-105552433
CIL_00033Y CIL_00033Y_0001 CGP 9:105447796-105641118

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085385 Ralgapa1-201 protein_coding Mus_musculus 0 7989
ENSMUST00000110687 Ralgapa1-202 protein_coding Mus_musculus 0 7989
ENSMUST00000061934 Gm9812-201 pseudogene Mus_musculus 1e-38 167

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