C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ubiquitin specific peptidase 40 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000443711  |
USP40-002 |
ENSG00000085982 |
9606 | - |
2:233560743-233566734  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003R9 | CIL_0003R9_0001 | CGP | 2:233354507-233566782 |
| CIL_0007HK | CIL_0007HK_0001 | CGP | 2:233475520-233773310 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0036459 | IEA | ubiquitinyl hydrolase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000186315
|
Usp40-004 | retained_intron | Mus_musculus | 0 | 407 |
|
ENSMUST00000187758
|
Usp40-001 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000040783
|
Usp40-003 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000189586
|
Usp40-005 | retained_intron | Mus_musculus | 0 | 337 |
|
ENSMUST00000188332
|
Usp40-002 | nonsense_mediated_decay | Mus_musculus | 0 | 337 |
|
ENSMUST00000187871
|
Usp40-006 | retained_intron | Mus_musculus | 0 | 296 |
