C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003R9_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000077044-ENSG00000085982 | CGP | 9606 | 2:233354507-233566782  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000077044  (DGKD)diacylglycerol kinase, delta 130kDa |
ENST00000264057 (DGKD-001)
|
233354507-233472100 | protein_coding | |
|
ENST00000409813 (DGKD-010)
|
233388154-233472096 | protein_coding | ||
|
ENST00000427930 (DGKD-011)
|
233354508-233435894 | protein_coding | ||
|
ENST00000430834 (DGKD-003)
|
233438313-233472104 | nonsense_mediated_decay | ||
|
ENST00000442524 (DGKD-014)
|
233354572-233392399 | protein_coding | ||
|
ENST00000447484 (DGKD-004)
|
233385945-233434899 | protein_coding | ||
|
ENST00000465569 (DGKD-007)
|
233448030-233449172 | retained_intron | ||
|
ENST00000471764 (DGKD-008)
|
233458239-233459867 | retained_intron | ||
|
ENST00000472732 (DGKD-012)
|
233408891-233435924 | processed_transcript | ||
|
ENST00000474488 (DGKD-002)
|
233434467-233442591 | retained_intron | ||
|
ENST00000480535 (DGKD-006)
|
233447701-233449155 | processed_transcript | ||
|
ENST00000489613 (DGKD-013)
|
233386054-233388985 | retained_intron | ||
|
ENST00000490764 (DGKD-005)
|
233419241-233457817 | retained_intron | ||
|
ENST00000495901 (DGKD-009)
|
233463814-233467150 | retained_intron | ||
|
ENST00000622717 (DGKD-201)
|
233388154-233472096 | protein_coding | ||
|
ENSG00000085982 (USP40) ubiquitin specific peptidase 40 |
ENST00000251722 (USP40-001)
|
233475526-233566782 | protein_coding | |
|
ENST00000409945 (USP40-004)
|
233492664-233512502 | protein_coding | ||
|
ENST00000427112 (USP40-017)
|
233477392-233565590 | protein_coding | ||
|
ENST00000427947 (USP40-008)
|
233554325-233566710 | retained_intron | ||
|
ENST00000430158 (USP40-005)
|
233487681-233511758 | protein_coding | ||
|
ENST00000443711 (USP40-002)
|
233560743-233566734 | protein_coding | ||
|
ENST00000450940 (USP40-011)
|
233485541-233493477 | nonsense_mediated_decay | ||
|
ENST00000450966 (USP40-201)
|
233475520-233565590 | protein_coding | ||
|
ENST00000452724 (USP40-015)
|
233519426-233523252 | protein_coding | ||
|
ENST00000454354 (USP40-013)
|
233485587-233489461 | protein_coding | ||
|
ENST00000464956 (USP40-014)
|
233481236-233481642 | processed_transcript | ||
|
ENST00000473191 (USP40-016)
|
233485606-233491339 | retained_intron | ||
|
ENST00000483216 (USP40-010)
|
233496794-233512892 | retained_intron | ||
|
ENST00000483519 (USP40-006)
|
233475526-233489640 | retained_intron | ||
|
ENST00000484528 (USP40-007)
|
233556586-233566782 | retained_intron | ||
|
ENST00000485943 (USP40-009)
|
233525511-233542616 | processed_transcript | ||
|
ENST00000496298 (USP40-012)
|
233485566-233489869 | processed_transcript | ||
|
ENSG00000201013 (Y_RNA) Y RNA |
ENST00000364143 (Y_RNA.1-409)
|
233379843-233379955 | misc_RNA | |
|
ENSG00000271639 (RP11-289A15.1) |
ENST00000604535 (RP11-289A15.1-001)
|
233545482-233547032 | processed_pseudogene | |
| CIL_0003R9_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000070738-ENSMUSG00000005501 | CGP | 10090 | 1:87853287-88008551 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000005501 (Usp40) ubiquitin specific peptidase 40 |
ENSMUST00000040783 (Usp40-003)
|
87945121-88008551 | protein_coding | |
|
ENSMUST00000186315 (Usp40-004)
|
87985755-88008528 | retained_intron | ||
|
ENSMUST00000186670 (Usp40-009)
|
87949699-87951673 | retained_intron | ||
|
ENSMUST00000187758 (Usp40-001)
|
87946443-88008534 | protein_coding | ||
|
ENSMUST00000187871 (Usp40-006)
|
88005895-88008229 | retained_intron | ||
|
ENSMUST00000188332 (Usp40-002)
|
87946443-88008534 | nonsense_mediated_decay | ||
|
ENSMUST00000189409 (Usp40-007)
|
87945119-87975898 | nonsense_mediated_decay | ||
|
ENSMUST00000189586 (Usp40-005)
|
88005895-88008550 | retained_intron | ||
|
ENSMUST00000190446 (Usp40-008)
|
87965017-87967195 | retained_intron | ||
|
ENSMUSG00000070738 (Dgkd) diacylglycerol kinase, delta |
ENSMUST00000027517 (Dgkd-001)
|
87853287-87944490 | protein_coding | |
|
ENSMUST00000185260 (Dgkd-005)
|
87931982-87938253 | protein_coding | ||
|
ENSMUST00000189448 (Dgkd-007)
|
87938385-87945178 | protein_coding | ||
|
ENSMUST00000189726 (Dgkd-006)
|
87935283-87940265 | retained_intron | ||
|
ENSMUST00000190061 (Dgkd-002)
|
87934397-87945180 | protein_coding | ||
|
ENSMUST00000190243 (Dgkd-003)
|
87880435-87915744 | retained_intron | ||
|
ENSMUST00000191589 (Dgkd-004)
|
87917898-87921971 | retained_intron | ||
Expression Patterns
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