C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin specific peptidase 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189586 Usp40-005 ENSMUSG00000005501 10090 - 1:88005895-88008550 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RA CIL_0003RA_0002 CGP 1:87803680-87945180
CIL_0003R9 CIL_0003R9_0002 CGP 1:87853287-88008551
CIL_0007HK CIL_0007HK_0002 CGP 1:87945119-88219004

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251722 USP40-001 protein_coding Homo_sapiens 0 353
ENST00000427112 USP40-017 protein_coding Homo_sapiens 0 296
ENST00000427947 USP40-008 retained_intron Homo_sapiens 0 331
ENST00000443711 USP40-002 protein_coding Homo_sapiens 0 337
ENST00000450966 USP40-201 protein_coding Homo_sapiens 0 296
ENST00000484528 USP40-007 retained_intron Homo_sapiens 0 353

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