C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ubiquitin specific peptidase 40 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000188332  |
Usp40-002 |
ENSMUSG00000005501 |
10090 | - |
1:87946443-88008534  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003RA | CIL_0003RA_0002 | CGP | 1:87803680-87945180 |
| CIL_0003R9 | CIL_0003R9_0002 | CGP | 1:87853287-88008551 |
| CIL_0007HK | CIL_0007HK_0002 | CGP | 1:87945119-88219004 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000251722
|
USP40-001 | protein_coding | Homo_sapiens | 0 | 3214 |
|
ENST00000427112
|
USP40-017 | protein_coding | Homo_sapiens | 0 | 3214 |
|
ENST00000427947
|
USP40-008 | retained_intron | Homo_sapiens | 0 | 584 |
|
ENST00000443711
|
USP40-002 | protein_coding | Homo_sapiens | 0 | 337 |
|
ENST00000450966
|
USP40-201 | protein_coding | Homo_sapiens | 0 | 3214 |
|
ENST00000452724
|
USP40-015 | protein_coding | Homo_sapiens | 0 | 248 |
|
ENST00000484528
|
USP40-007 | retained_intron | Homo_sapiens | 0 | 414 |
|
ENST00000485943
|
USP40-009 | processed_transcript | Homo_sapiens | 0 | 361 |
