C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 88A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444458 CCDC88A-003 ENSG00000115355 9606 - 2:55288088-55309207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444458
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444458 0.795±0.00 1.450±0.00 7.079±1.74 1.247±0.00 1.013±0.00 0.715±0.00 2.126±0.75 0.627±0.00 1.408±0.00 0.296±0.00 2.011±0.21 0.823±0.23 3.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z6 CIL_0000Z6_0002 CGP 2:55236595-55419921

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040182 Ccdc88a-001 protein_coding Mus_musculus 0 2061
ENSMUST00000123561 Ccdc88a-002 protein_coding Mus_musculus 0 695
ENSMUST00000140194 Ccdc88a-004 protein_coding Mus_musculus 0 411
ENSMUST00000144450 Ccdc88a-006 processed_transcript Mus_musculus 0 243

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