C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cytochrome c oxidase subunit VIc pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444980 COX6CP2-001 ENSG00000231715 9606 + 20:50479767-50479991 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000444980
Transcript ID Ovary
ENST00000444980 0.229±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZW CIL_0007ZW_0001 VISTA 20:50090256-50696209
CIL_0007H3 CIL_0007H3_0001 CGP 20:50190734-50585241
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149263 Gm6265-001 processed_pseudogene Mus_musculus 7.00649e-43 176
ENSMUST00000153512 Cox6c-004 protein_coding Mus_musculus 2e-39 165
ENSMUST00000014457 Cox6c-001 protein_coding Mus_musculus 2e-39 165
ENSMUST00000181423 Gm16399-001 processed_pseudogene Mus_musculus 4e-31 137
ENSMUST00000127999 Cox6c-002 retained_intron Mus_musculus 2e-28 128

Loading