C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c, somatic pseudogene 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445119 CYCSP24-001 ENSG00000227666 9606 + 9:94038030-94038345 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000445119
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000445119 0.147±0.00 0.156±0.00 0.637±0.31 0.546±0.23 2.496±0.00 1.026±0.83 0.210±0.00 2.575±0.00 1.673±0.00 1.161±1.32 0.173±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WO CIL_0008WO_0001 VISTA 9:93563376-94165036
CIL_0008XX CIL_0008XX_0001 VISTA 9:93838844-94440653

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073080 Gm10053-201 protein_coding Mus_musculus 0 409
ENSMUST00000077766 Cycs-002 retained_intron Mus_musculus 0 409
ENSMUST00000161401 Cycs-001 protein_coding Mus_musculus 0 409
ENSMUST00000118431 Gm13772-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000078246 Gm10108-201 protein_coding Mus_musculus 0 398
ENSMUST00000119355 Gm13252-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000119535 Gm11625-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000119817 Gm11857-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000120227 Gm14238-001 processed_pseudogene Mus_musculus 0 252

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