C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10108
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078246 Gm10108-201 ENSMUSG00000062038 10090 - 5:13121449-13121766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaENSMUST00000078246
Transcript ID Brain Liver Muscle Ovary Placenta
ENSMUST00000078246 2.337±0.00 6.371±6.33 0.592±0.00 0.326±0.00 0.125±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005739 IEA mitochondrion
GO:0009055 IEA electron carrier activity
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261523 RORA-003 protein_coding Homo_sapiens 1e-20 106
ENST00000305786 CYCS-001 protein_coding Homo_sapiens 0 411
ENST00000399027 CYCSP55-001 processed_pseudogene Homo_sapiens 0 357
ENST00000402289 CYCSP45-001 processed_pseudogene Homo_sapiens 0 377
ENST00000409409 CYCS-002 protein_coding Homo_sapiens 0 411
ENST00000409764 CYCS-003 protein_coding Homo_sapiens 0 411
ENST00000411715 CYCSP19-001 processed_pseudogene Homo_sapiens 0 364
ENST00000413447 CYCS-004 protein_coding Homo_sapiens 0 387
ENST00000414485 CYCSP33-001 processed_pseudogene Homo_sapiens 0 340
ENST00000415043 CYCSP5-001 processed_pseudogene Homo_sapiens 0 202
ENST00000417124 CYCSP48-001 processed_pseudogene Homo_sapiens 0 270
ENST00000417973 CYCSP10-001 processed_pseudogene Homo_sapiens 0 342
ENST00000420810 CYCSP49-001 processed_pseudogene Homo_sapiens 0 291
ENST00000422857 CYCSP52-001 processed_pseudogene Homo_sapiens 0 359
ENST00000434498 CYCSP6-001 processed_pseudogene Homo_sapiens 0 313
ENST00000436426 CYCSP11-001 processed_pseudogene Homo_sapiens 0 396
ENST00000437729 CYCSP12-001 processed_pseudogene Homo_sapiens 0 267
ENST00000440548 CYCSP32-001 processed_pseudogene Homo_sapiens 0 361
ENST00000443545 CYCSP51-001 processed_pseudogene Homo_sapiens 0 411
ENST00000445119 CYCSP24-001 processed_pseudogene Homo_sapiens 0 398
ENST00000450823 CYCSP42-001 processed_pseudogene Homo_sapiens 1e-35 152
ENST00000451978 CYCSP35-001 processed_pseudogene Homo_sapiens 0 243
ENST00000458172 CYCSP34-001 processed_pseudogene Homo_sapiens 0 372
ENST00000473154 CYCSP20-001 processed_pseudogene Homo_sapiens 0 296
ENST00000517555 CYCSP22-001 processed_pseudogene Homo_sapiens 0 375
ENST00000523393 RP1-273G13.2-001 processed_pseudogene Homo_sapiens 0 372
ENST00000525280 CYCSP25-001 processed_pseudogene Homo_sapiens 0 394
ENST00000527643 CYCSP27-001 processed_pseudogene Homo_sapiens 0 233
ENST00000533731 CYCSP29-001 processed_pseudogene Homo_sapiens 0 333
ENST00000559840 CYCSP38-001 transcribed_processed_pseudogene Homo_sapiens 0 230
ENST00000565821 CYCSP39-001 processed_pseudogene Homo_sapiens 0 368
ENST00000581473 RP11-758G22.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000604815 CYCSP1-001 processed_pseudogene Homo_sapiens 0 407

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