C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal regeneration related protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446294 NREP-005 ENSG00000134986 9606 - 5:111729316-111757470 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyTestisENST00000446294
Transcript ID Adrenal Brain Breast Colon Heart Kidney Testis
ENST00000446294 5.450±0.00 16.270±0.00 9.428±0.00 5.363±3.10 9.602±0.00 6.717±0.00 9.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004US CIL_0004US_0001 CGP 5:111496033-111997464
CIL_0008PC CIL_0008PC_0001 VISTA 5:111547843-112153084
CIL_0008TM CIL_0008TM_0001 VISTA 5:111547866-112149626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168890 Nrep-202 protein_coding Mus_musculus 0 1565
ENSMUST00000171533 Nrep-203 protein_coding Mus_musculus 0 1563
ENSMUST00000051087 Nrep-201 protein_coding Mus_musculus 0 1563

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