C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glioblastoma amplified sequence
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446778 GBAS-002 ENSG00000146729 9606 + 7:55964581-56000181 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonTestisENST00000446778
Transcript ID Breast Colon Testis
ENST00000446778 7.583±0.00 7.447±0.00 8.709±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000646 CIL_000646_0001 CGP 7:55793544-55955239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 ISS mitochondrion
GO:0005887 TAS integral component of plasma membrane
GO:0006119 IMP oxidative phosphorylation
GO:0006754 IMP ATP biosynthetic process
GO:0016020 TAS membrane
GO:2000984 IMP negative regulation of ATP citrate synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186265 Gbas-201 protein_coding Mus_musculus 0 444
ENSMUST00000124342 Gbas-002 nonsense_mediated_decay Mus_musculus 0 444
ENSMUST00000086046 Gbas-001 protein_coding Mus_musculus 0 444

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