C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatid perinuclear RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447404 STRBP-201 ENSG00000165209 9606 - 9:123121631-123184310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLiverLungOvaryENST00000447404
Transcript ID Bladder Heart Liver Lung Ovary
ENST00000447404 0.604±0.00 0.286±0.00 0.430±0.00 1.939±0.00 0.755±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003725 IEA double-stranded RNA binding
GO:0003727 IEA single-stranded RNA binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006928 IEA cellular component movement
GO:0007275 IEA multicellular organismal development
GO:0007286 IEA spermatid development
GO:0007638 IEA mechanosensory behavior
GO:0015630 IEA microtubule cytoskeleton
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028279 Strbp-201 protein_coding Mus_musculus 0 4754
ENSMUST00000072186 Strbp-001 protein_coding Mus_musculus 0 4338
ENSMUST00000183690 Strbp-003 nonsense_mediated_decay Mus_musculus 0 3081
ENSMUST00000135488 Strbp-002 processed_transcript Mus_musculus 0 952
ENSMUST00000145808 Strbp-006 protein_coding Mus_musculus 0 894
ENSMUST00000155237 Strbp-005 protein_coding Mus_musculus 0 747
ENSMUST00000144206 Strbp-004 processed_transcript Mus_musculus 1.99965e-42 180

Loading