C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 59
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447700 RPL7P59-001 ENSG00000225918 9606 - 7:145039999-145040941 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000447700
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000447700 0.095±0.00 0.025±0.00 0.037±0.00 0.048±0.00 0.113±0.00 0.011±0.00 0.050±0.00 0.011±0.00 0.012±0.00 0.098±0.00 0.049±0.00 0.082±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XR CIL_0004XR_0001 CGP 7:144451941-148420998

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 394
ENSMUST00000136180 1700073E17Rik-004 processed_transcript Mus_musculus 0 394
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 394
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 339
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 333
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 333
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000149566 Rpl7-003 protein_coding Mus_musculus 0 279
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 224
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 224

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