C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13315
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120376 Gm13315-001 ENSMUSG00000083305 10090 + 2:14721133-14722121 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000120376
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000120376 0.087±0.04 0.253±0.09 0.178±0.09 0.130±0.02 0.149±0.00 0.074±0.04 0.066±0.04 0.037±0.01 0.216±0.14 0.041±0.00 0.239±0.20 0.170±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AA CIL_0005AA_0002 CGP 2:14388316-14987908
CIL_0005A3 CIL_0005A3_0002 CGP 2:14604306-15054884

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000227157 LDHA-003 protein_coding Homo_sapiens 0 638
ENST00000379412 LDHA-005 protein_coding Homo_sapiens 0 928
ENST00000394996 LDHAP5-001 processed_pseudogene Homo_sapiens 0 492
ENST00000396222 LDHA-002 protein_coding Homo_sapiens 0 612
ENST00000397561 LDHAP4-001 processed_pseudogene Homo_sapiens 0 822
ENST00000398295 LDHAP7-001 processed_pseudogene Homo_sapiens 0 604
ENST00000422447 LDHA-001 protein_coding Homo_sapiens 0 928
ENST00000430553 LDHA-010 protein_coding Homo_sapiens 0 267
ENST00000448312 LDHAP3-001 processed_pseudogene Homo_sapiens 0 745
ENST00000478970 LDHA-009 protein_coding Homo_sapiens 0 411
ENST00000494573 LDHA-007 retained_intron Homo_sapiens 0 267
ENST00000495052 LDHA-004 protein_coding Homo_sapiens 0 351
ENST00000535451 LDHA-014 protein_coding Homo_sapiens 0 250
ENST00000539814 LDHA-016 nonsense_mediated_decay Homo_sapiens 0 267
ENST00000540430 LDHA-201 protein_coding Homo_sapiens 0 928
ENST00000541097 LDHA-019 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000542179 LDHA-020 protein_coding Homo_sapiens 0 928
ENST00000543445 LDHA-013 protein_coding Homo_sapiens 0 472

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