C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11980
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121445 Gm11980-001 ENSMUSG00000083075 10090 + 11:6685824-6686809 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainPlacentaTestisENSMUST00000121445
Transcript ID Adipose Brain Placenta Testis
ENSMUST00000121445 0.153±0.07 0.023±0.02 0.027±0.01 0.066±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000227157 LDHA-003 protein_coding Homo_sapiens 0 492
ENST00000375710 LDHA-023 retained_intron Homo_sapiens 0 446
ENST00000379412 LDHA-005 protein_coding Homo_sapiens 0 664
ENST00000396222 LDHA-002 protein_coding Homo_sapiens 0 481
ENST00000397561 LDHAP4-001 processed_pseudogene Homo_sapiens 0 592
ENST00000422447 LDHA-001 protein_coding Homo_sapiens 0 664
ENST00000430553 LDHA-010 protein_coding Homo_sapiens 0 248
ENST00000448312 LDHAP3-001 processed_pseudogene Homo_sapiens 0 512
ENST00000460405 LDHA-008 retained_intron Homo_sapiens 0 359
ENST00000478970 LDHA-009 protein_coding Homo_sapiens 0 326
ENST00000486690 LDHA-017 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000494573 LDHA-007 retained_intron Homo_sapiens 0 248
ENST00000495052 LDHA-004 protein_coding Homo_sapiens 0 326
ENST00000535451 LDHA-014 protein_coding Homo_sapiens 0 237
ENST00000537296 LDHA-022 retained_intron Homo_sapiens 0 479
ENST00000539814 LDHA-016 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000540430 LDHA-201 protein_coding Homo_sapiens 0 664
ENST00000541097 LDHA-019 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000542179 LDHA-020 protein_coding Homo_sapiens 0 664
ENST00000543445 LDHA-013 protein_coding Homo_sapiens 0 333
ENST00000545215 LDHA-011 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000545467 LDHA-018 nonsense_mediated_decay Homo_sapiens 5.99756e-43 178

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