C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein C (C1/C2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449098 HNRNPC-201 ENSG00000092199 9606 - 14:21210556-21234245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000449098
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000449098 45.413±0.00 67.811±0.00 38.798±0.00 88.030±0.00 47.878±0.00 18.426±0.00 39.581±0.00 22.968±0.00 69.301±8.69 58.343±1.91 76.698±30.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027N CIL_00027N_0001 CGP 14:21154865-21269494
CIL_00027O CIL_00027O_0001 CGP 14:21209136-21351301

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164655 Hnrnpc-202 protein_coding Mus_musculus 0 1282
ENSMUST00000111610 Hnrnpc-201 protein_coding Mus_musculus 0 1282
ENSMUST00000122361 Gm12696-001 processed_pseudogene Mus_musculus 0 1110
ENSMUST00000117947 Gm12445-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000174284 Gm18889-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000190510 RP24-495G2.1-001 processed_pseudogene Mus_musculus 0 379

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