C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 142
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449707 ZNF142-001 ENSG00000115568 9606 - 2:218637916-218659524 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartLiverMuscleOvaryPlacentaTestisENST00000449707
Transcript ID Adipose Adrenal Brain Heart Liver Muscle Ovary Placenta Testis
ENST00000449707 1.385±0.00 1.258±0.00 3.747±0.00 3.351±0.00 0.977±0.14 9.181±0.00 3.542±0.98 1.053±0.02 3.968±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AR CIL_0000AR_0002 CGP 2:218607765-218659655
CIL_0000AQ CIL_0000AQ_0002 CGP 2:218637916-218663443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066986 Zfp142-004 protein_coding Mus_musculus 0 2776
ENSMUST00000127921 Zfp142-003 nonsense_mediated_decay Mus_musculus 0 2477
ENSMUST00000156613 Zfp142-005 nonsense_mediated_decay Mus_musculus 0 2477
ENSMUST00000027315 Zfp142-008 protein_coding Mus_musculus 0 2477
ENSMUST00000113737 Zfp142-001 protein_coding Mus_musculus 0 2477
ENSMUST00000067916 Plcd4-201 protein_coding Mus_musculus 0 689
ENSMUST00000113749 Plcd4-202 protein_coding Mus_musculus 0 689
ENSMUST00000141412 Plcd4-003 nonsense_mediated_decay Mus_musculus 0 689
ENSMUST00000130112 Zfp142-002 retained_intron Mus_musculus 0 298
ENSMUST00000136865 Zfp142-006 retained_intron Mus_musculus 0 298

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