C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HscB mitochondrial iron-sulfur cluster co-chaperone
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450178 HSCB-002 ENSG00000100209 9606 + 22:28742042-28757510 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLungMuscleENST00000450178
Transcript ID Adipose Bladder Brain Breast Colon Lung Muscle
ENST00000450178 1.064±0.00 0.361±0.00 0.377±0.00 3.177±0.00 0.380±0.00 1.609±0.00 1.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NO CIL_0008NO_0001 VISTA 22:28282570-28883176
CIL_0006WX CIL_0006WX_0002 CGP 22:28687743-28757515

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006457 IEA protein folding
GO:0051087 IEA chaperone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056937 Hscb-001 protein_coding Mus_musculus 0 396
ENSMUST00000144850 Hscb-003 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000122921 Hscb-002 retained_intron Mus_musculus 0 296
ENSMUST00000145318 Hscb-004 protein_coding Mus_musculus 4.99997e-41 172

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