C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trinucleotide repeat containing 6A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450465 TNRC6A-004 ENSG00000090905 9606 + 16:24791487-24824786 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLungMuscleOvaryPlacentaENST00000450465
Transcript ID Bladder Breast Kidney Lung Muscle Ovary Placenta
ENST00000450465 2.409±0.00 4.766±0.00 2.956±0.00 1.740±0.52 2.595±0.00 4.347±2.10 0.799±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V8 CIL_0003V8_0002 CGP 16:24537693-24827632
CIL_0005KT CIL_0005KT_0001 CGP 16:24729695-24911628

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094053 Tnrc6a-201 protein_coding Mus_musculus 0 4874
ENSDART00000113219 TNRC6A-201 protein_coding Danio_rerio 0 819

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