C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chordin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450923 CHRD-014 ENSG00000090539 9606 + 3:184380207-184389829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000450923
Transcript ID Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000450923 4.565±0.00 0.755±0.00 2.249±1.62 0.360±0.01 2.379±1.45 0.192±0.00 0.149±0.00 3.100±1.13 0.834±0.06 1.434±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_00056V CIL_00056V_0001 CGP 3:184371935-184390736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007275 IEA multicellular organismal development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007171 Chrd-001 protein_coding Mus_musculus 0 3232
ENSMUST00000115423 Chrd-002 protein_coding Mus_musculus 0 2002
ENSMUST00000153299 Chrd-003 nonsense_mediated_decay Mus_musculus 0 1672
ENSMUST00000151150 Chrd-004 retained_intron Mus_musculus 0 462

Loading