C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000090534-ENSG00000090539 CGP 9606 3:184371935-184390736
GeneTranscriptPositionBiotype
ENSG00000090534 (THPO)
thrombopoietin 		ENST00000204615 (THPO-001) 184371935-184378144 protein_coding
ENST00000421442 (THPO-003) 184372327-184376259 protein_coding
ENST00000445696 (THPO-002) 184372269-184378140 protein_coding
ENST00000477594 (THPO-004) 184372898-184373437 processed_transcript
ENSG00000090539 (CHRD)
chordin 		ENST00000204604 (CHRD-001) 184380073-184389829 protein_coding
ENST00000348986 (CHRD-013) 184380319-184389829 protein_coding
ENST00000356534 (CHRD-003) 184380073-184382747 nonsense_mediated_decay
ENST00000420973 (CHRD-004) 184380073-184389829 nonsense_mediated_decay
ENST00000448472 (CHRD-002) 184380073-184389829 nonsense_mediated_decay
ENST00000450923 (CHRD-014) 184380207-184389829 protein_coding
ENST00000459711 (CHRD-010) 184380452-184381749 retained_intron
ENST00000460627 (CHRD-005) 184380073-184389829 retained_intron
ENST00000461120 (CHRD-006) 184382145-184382930 retained_intron
ENST00000461684 (CHRD-008) 184381019-184382034 retained_intron
ENST00000464833 (CHRD-015) 184384788-184387401 retained_intron
ENST00000470150 (CHRD-016) 184380321-184390736 retained_intron
ENST00000482014 (CHRD-018) 184381406-184382173 retained_intron
ENST00000482805 (CHRD-011) 184380992-184382042 processed_transcript
ENST00000485883 (CHRD-017) 184380623-184381968 retained_intron
ENST00000486066 (CHRD-009) 184381019-184381890 retained_intron
ENST00000496527 (CHRD-007) 184380348-184381160 retained_intron
CIL_00056V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022847-ENSMUSG00000006958 CGP 10090 16:20725158-20742384
GeneTranscriptPositionBiotype
ENSMUSG00000006958 (Chrd)
chordin 		ENSMUST00000007171 (Chrd-001) 20733127-20742384 protein_coding
ENSMUST00000115423 (Chrd-002) 20733127-20738152 protein_coding
ENSMUST00000151150 (Chrd-004) 20736206-20742382 retained_intron
ENSMUST00000153299 (Chrd-003) 20733127-20742384 nonsense_mediated_decay
ENSMUSG00000022847 (Thpo)
thrombopoietin 		ENSMUST00000076422 (Thpo-002) 20725158-20730627 protein_coding
ENSMUST00000115437 (Thpo-001) 20725158-20734511 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056V_0001ENSG00000090534ENST00000204615ENST00000421442ENST00000445696ENST00000477594ENSG00000090539ENST00000204604ENST00000348986ENST00000356534ENST00000420973ENST00000448472ENST00000450923ENST00000459711ENST00000460627ENST00000461120ENST00000461684ENST00000464833ENST00000470150ENST00000482014ENST00000482805ENST00000485883ENST00000486066ENST00000496527CIL_00056V_0002ENSMUSG00000006958ENSMUST00000007171ENSMUST00000115423ENSMUST00000151150ENSMUST00000153299ENSMUSG00000022847ENSMUST00000076422ENSMUST00000115437
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056V_0001ENSG00000090534ENST00000204615ENST00000421442ENST00000445696ENSG00000090539ENST00000204604ENST00000348986ENST00000420973ENST00000448472ENST00000450923ENST00000460627ENST00000461120ENST00000464833ENST00000470150CIL_00056V_0002ENSMUSG00000006958ENSMUST00000007171ENSMUST00000115423ENSMUST00000151150ENSMUST00000153299ENSMUSG00000022847ENSMUST00000076422ENSMUST00000115437
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090534 ENST00000204615 N/A N/A 0.152±0.00 N/A 0.225±0.00 0.248±0.00 N/A 0.218±0.00 1.557±0.00 N/A N/A 0.159±0.00 N/A N/A
ENST00000421442 0.411±0.00 0.600±0.00 N/A 0.515±0.37 0.568±0.00 N/A 0.141±0.00 1.461±0.00 4.893±0.00 0.206±0.00 N/A 0.523±0.31 0.322±0.08 1.247±0.00
ENST00000445696 0.163±0.00 0.112±0.00 N/A 0.509±0.00 0.228±0.00 N/A N/A 0.498±0.00 5.605±0.00 0.141±0.00 0.070±0.00 0.299±0.15 0.088±0.00 0.597±0.33
ENST00000477594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000090539 ENST00000204604 1.280±0.00 3.176±0.00 N/A 1.899±0.44 N/A 2.550±0.00 N/A 9.090±0.00 3.946±0.00 1.080±0.00 0.576±0.00 4.998±3.16 2.540±1.08 1.345±0.00
ENST00000348986 N/A N/A N/A N/A N/A N/A 0.982±0.00 N/A N/A 1.107±0.00 0.326±0.00 N/A 1.589±0.31 0.320±0.00
ENST00000356534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420973 1.149±0.00 N/A 0.734±0.00 1.664±0.00 N/A 0.035±0.00 0.498±0.00 N/A 6.365±0.00 N/A N/A N/A N/A 0.265±0.00
ENST00000448472 N/A N/A N/A N/A N/A 1.265±0.00 N/A N/A N/A 2.035±0.00 N/A N/A N/A N/A
ENST00000450923 N/A 4.565±0.00 N/A 0.755±0.00 2.249±1.62 N/A 0.360±0.01 2.379±1.45 0.192±0.00 0.149±0.00 N/A 3.100±1.13 0.834±0.06 1.434±0.00
ENST00000459711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460627 0.319±0.00 0.973±0.00 N/A 1.236±0.00 N/A N/A 0.175±0.00 N/A N/A 0.786±0.00 N/A 1.256±0.20 N/A 0.129±0.00
ENST00000461120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.452±0.00 0.279±0.00 N/A N/A
ENST00000461684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464833 N/A N/A 0.904±0.00 3.626±0.00 N/A N/A 0.429±0.00 N/A N/A N/A N/A 0.549±0.00 N/A N/A
ENST00000470150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A 0.226±0.00
ENST00000482014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006958 ENSMUST00000007171 6.527±1.87 14.666±2.78 7.425±0.46 5.207±2.46 4.532±1.29 3.699±0.53 0.504±0.20 2.623±0.79 2.181±1.47 1.537±0.28 1.291±0.26 3.705±1.84 0.894±0.25 0.428±0.17
ENSMUST00000115423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.361±0.00
ENSMUST00000151150 N/A N/A N/A 1.142±0.25 0.289±0.00 N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 0.061±0.05
ENSMUST00000153299 1.613±0.00 3.089±0.81 1.844±0.00 1.616±0.16 N/A 0.789±0.06 0.261±0.11 N/A N/A N/A 0.560±0.00 0.862±0.00 N/A 0.139±0.01
ENSMUSG00000022847 ENSMUST00000076422 2.286±0.27 6.642±0.75 N/A N/A 2.617±0.36 2.488±0.66 0.326±0.00 5.490±1.05 6.261±3.74 0.629±0.17 2.613±0.50 0.917±0.05 1.590±1.09 N/A
ENSMUST00000115437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.221±0.00

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