C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPEG complex locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451076 SPEG-023 ENSG00000072195 9606 + 2:219444657-219448158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000451076
Transcript ID Bladder
ENST00000451076 0.438±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006O0 CIL_0006O0_0001 CGP 2:219418377-219498287
CIL_0006O1 CIL_0006O1_0001 CGP 2:219434846-219506988

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125118 Speg-007 retained_intron Mus_musculus 0 560
ENSMUST00000113590 Speg-002 protein_coding Mus_musculus 0 560
ENSMUST00000087122 Speg-001 protein_coding Mus_musculus 0 560
ENSMUST00000132228 Speg-011 nonsense_mediated_decay Mus_musculus 0 459
ENSMUST00000125306 Speg-012 nonsense_mediated_decay Mus_musculus 1.99965e-42 176
ENSMUST00000148515 Speg-006 protein_coding Mus_musculus 1.99965e-42 176
ENSMUST00000146705 Speg-005 processed_transcript Mus_musculus 2e-37 159

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