C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Wilms tumor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452863 WT1-004 ENSG00000184937 9606 - 11:32387784-32435345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000452863
Transcript ID Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000452863 0.022±0.00 0.654±0.36 6.239±0.00 0.150±0.00 0.135±0.00 0.015±0.00 17.746±8.95 1.669±0.26 5.292±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NI CIL_0008NI_0001 VISTA 11:31875944-32477188
CIL_0004RH CIL_0004RH_0002 CGP 11:32387775-32606262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139585 Wt1-004 protein_coding Mus_musculus 0 1548
ENSMUST00000133470 Wt1-002 protein_coding Mus_musculus 0 1546
ENSMUST00000111098 Wt1-008 protein_coding Mus_musculus 0 1463
ENSMUST00000111099 Wt1-006 protein_coding Mus_musculus 0 1086
ENSMUST00000143043 Wt1-001 protein_coding Mus_musculus 0 1046
ENSMUST00000146842 Wt1-003 protein_coding Mus_musculus 0 797
ENSMUST00000153944 Wt1-009 retained_intron Mus_musculus 0 603

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